April 19th, 2010: Check out our recently developed (and just released) open source software (CplexA) and corresponding tutorial. CplexA is a Mathematica package to compute the needed quantities to study macromolecular assembly and its effects in gene regulation. CplexA and the tutorial are available at http://sourceforge.net/projects/cplexa/. See our Software site for more details about how to use and cite CplexA.
CplexA Now Available
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